Serotonergic neurons, hindbrain
Properties
| Index | 81 |
| Symbol | HBSER5 |
| Cells | 64 |
| Region | Pons |
| Likely location | Nucleus raphe pons (pallidus, oscurus, magnus, B1-3) |
| Developmental compartment | Rhombencephalon |
| Neurotransmitters | GABASer |
| Marker genes | Tph2 5031425F14Rik Slc18a2 |
| Comments | |
| Taxon | Neurons CNS neurons Cholinergic, monoaminergic and peptidergic neurons Cholinergic and monoaminergic neurons |
Enriched genes
Table shows genes that are highly enriched (but not necessarily unique) in this cluster, relative to all other clusters.
| Score | Gene | Description |
| 4831.3 | Tph2 | Tryptophan 5-hydroxylase 2 |
| 4313.0 | Slc6a4 | Sodium-dependent serotonin transporter |
| 3511.6 | Slc18a2 | Synaptic vesicular amine transporter |
| 3218.6 | Dlk1 | delta like non-canonical Notch ligand 1 |
| 2810.5 | Gchfr | GTP cyclohydrolase 1 feedback regulatory protein |
Heatmap and tSNE plot
| Click for heatmap in loom viewer | tSNE in loom viewer |
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Spatial distribution
Images show the correlation of gene expression for this cluster with each voxel in the Allen Mouse Brain Atlas. Click on the image for a high-resolution version.
