Chga

Mus musculus chromogranin A (Chga)

Properties

GeneChga
EntrezID 12652
RefSeqIDs NM_007693
GeneCardID
Allen Brain 12437
UniProtIDs with links P26339

Clusters expressing Chga

Table shows clusters that express the gene at a trinarization score >= 0.95

Expression Index Symbol Description Region
0.6169 1 TEGLU1 Excitatory neurons, cerebral cortex Telencephalon
0.4034 2 TEGLU3 Excitatory neurons, cerebral cortex Telencephalon
1.1314 3 TEGLU2 Excitatory neurons, cerebral cortex Telencephalon
1.4364 4 TEGLU20 Excitatory neurons, cerebral cortex Telencephalon
0.9829 5 TEGLU11 Excitatory neurons, cerebral cortex Telencephalon
0.6995 6 TEGLU12 Excitatory neurons, cerebral cortex Telencephalon
1.8557 7 TEGLU10 Excitatory neurons, cerebral cortex Telencephalon
0.5248 8 TEGLU9 Excitatory neurons, cerebral cortex Telencephalon
0.7131 9 TEGLU8 Excitatory neurons, cerebral cortex Telencephalon
0.361 10 TEGLU7 Excitatory neurons, cerebral cortex Telencephalon
0.3858 12 TEGLU13 Excitatory neurons, cerebral cortex Telencephalon
0.7143 13 TEGLU14 Excitatory neurons, cerebral cortex Telencephalon
0.3651 14 TEGLU5 Excitatory neurons, cerebral cortex Telencephalon
0.7312 16 TEGLU15 Excitatory neurons, cerebral cortex Telencephalon
0.5395 17 TEGLU17 Excitatory neurons, cerebral cortex Telencephalon
1.9696 18 TEGLU18 Excitatory neurons, cerebral cortex Telencephalon
1.2809 19 TEGLU19 Excitatory neurons, cerebral cortex Telencephalon
0.9038 21 TEGLU21 Excitatory neurons, hippocampus CA1 Telencephalon
1.2304 22 TEGLU4 Excitatory neurons, cerebral cortex Telencephalon
0.3471 23 TEGLU24 Excitatory neurons, hippocampus CA1 Telencephalon
0.5124 24 TEGLU23 Excitatory neurons, hippocampus CA3 Telencephalon
0.5357 46 OBINH5 External plexiform layer interneuron, olfactory bulb Telencephalon
1.1298 47 DEINH1 Inhibitory neurons, thalamus Diencephalon
1.3353 48 DEINH2 Inhibitory neurons, thalamus Diencephalon
0.9259 49 TEINH17 Axo-axonic, cortex/hippocampus Telencephalon
0.9598 50 TEINH18 Basket and bistratified cells, cortex/hippocampus Telencephalon
1.049 51 TEINH19 Hippocamposeptal projection, cortex/hippocampus Telencephalon
0.6753 52 TEINH21 Sleep-active, long-range projection interneurons, cortex/hippocampus Telencephalon
0.4177 53 TEINH16 Ivy and MGE-derived neurogliaform cells, cortex/hippocampus Telencephalon
0.3649 55 TEINH14 CGE-derived neurogliaform cells Cxcl14+, cortex/hippocampus Telencephalon
1.6187 56 TEINH20 Inhibitory interneurons, hippocampus Telencephalon
1.5706 57 TEINH13 Trilaminar cells, hippocampus Telencephalon
1.425 58 TEINH12 Non-border Cck interneurons, cortex/hippocampus Telencephalon
1.3642 59 TEINH9 Non-border Cck interneurons, hippocampus Telencephalon
1.3959 60 TEINH10 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
1.2667 61 TEINH11 R-LM border Cck interneurons, cortex/hippocampus Telencephalon
0.3969 62 TEINH4 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.3786 63 TEINH5 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
0.5965 64 TEINH8 Interneuron-selective interneurons, hippocampus Telencephalon
0.9412 65 TEINH7 Interneuron-selective interneurons, hippocampus Telencephalon
0.3241 66 TEINH6 Interneuron-selective interneurons, cortex/hippocampus Telencephalon
1.3636 67 TECHO Cholinergic interneurons, telencephalon Telencephalon
3.614 68 DECHO1 Cholinergic neurons, septal nucleus, Meissnert and diagonal band Diencephalon
0.6731 69 HBCHO4 Afferent nuclei of cranial nerves III-V Rhombencephalon
0.7222 70 HBCHO3 Afferent nuclei of cranial nerves VI-XII Rhombencephalon
0.95 71 HBADR Adrenergic cell groups of the medulla Rhombencephalon
1.3846 73 HYPEP7 Pmch neurons, hypothalamus Diencephalon
0.8438 74 HYPEP6 Orexin-producing neurons, hypothalamus Diencephalon
0.9574 75 MEGLU14 Glutamatergic projection neurons of the raphe nucleus Mesencephalon
0.7937 77 MBDOP2 Dopaminergic neurons, ventral midbrain (SNc, VTA) Mesencephalon
2.3524 78 HBSER1 Serotonergic neurons, hindbrain Rhombencephalon
1.8807 79 HBSER2 Serotonergic neurons, hindbrain Rhombencephalon
1.2299 80 HBSER3 Serotonergic neurons, hindbrain Rhombencephalon
1.1719 81 HBSER5 Serotonergic neurons, hindbrain Rhombencephalon
0.6528 82 HBSER4 Serotonergic neurons, hindbrain Rhombencephalon
0.4759 83 TEINH3 Inhibitory neurons, telencephalon Telencephalon
0.363 84 TEINH2 Inhibitory neurons, septal nucleus Telencephalon
0.4383 86 DEINH5 Peptidergic neurons, hypothalamus Diencephalon
0.7105 87 HYPEP3 Peptidergic neurons, hypothalamus Diencephalon
0.4346 88 HYPEP1 Peptidergic neurons, hypothalamus Diencephalon
0.5833 91 DEINH6 Peptidergic neurons, hypothalamus Diencephalon
0.5667 92 DEINH8 Inhibitory neurons, hypothalamus Diencephalon
1.0 97 SCINH11 Central canal neurons, spinal cord Spinal cord
0.5303 105 SCINH3 Inhibitory neurons, spinal cord Spinal cord
0.398 106 HBINH9 Inhibitory neurons, hindbrain Rhombencephalon
0.8291 107 SCINH2 Inhibitory neurons, spinal cord Spinal cord
0.5192 108 SCGLU1 Excitatory neurons, spinal cord Spinal cord
0.3548 110 SCGLU3 Excitatory neurons, spinal cord Spinal cord
0.3413 112 SCGLU5 Excitatory neurons, spinal cord Spinal cord
0.3857 113 SCGLU6 Excitatory neurons, spinal cord Spinal cord
0.5882 117 SCGLU10 Excitatory neurons, spinal cord Spinal cord
0.5375 118 HBGLU10 Excitatory neurons, hindbrain Rhombencephalon
0.514 119 HBGLU3 Excitatory neurons, hindbrain Rhombencephalon
0.745 120 HBGLU2 Excitatory neurons, hindbrain Rhombencephalon
0.6667 121 MEGLU2 Excitatory neurons, midbrain Mesencephalon
0.6204 122 MEGLU3 Excitatory neurons, midbrain Mesencephalon
1.0845 123 DEGLU5 Excitatory neurons, midbrain Mesencephalon
1.4639 124 MEGLU1 Excitatory neurons, midbrain Mesencephalon
0.587 125 MEGLU7 Excitatory neurons, midbrain Mesencephalon
0.3377 126 MEGLU8 Excitatory neurons, midbrain Mesencephalon
0.3292 127 MEGLU9 Excitatory neurons, midbrain Mesencephalon
0.3842 128 MEGLU10 Excitatory neurons, midbrain Mesencephalon
0.5462 129 MEGLU11 Excitatory neurons, midbrain Mesencephalon
0.6935 130 MBCHO1 Cholinergic neurons, midbrain red nucleus Mesencephalon
1.2517 131 MEGLU6 Excitatory neurons, midbrain Mesencephalon
0.5196 132 MEGLU5 Excitatory neurons, midbrain Mesencephalon
0.5294 133 MEGLU4 Excitatory neurons, midbrain Mesencephalon
1.0192 136 HBGLU1 Excitatory neurons, hindbrain Rhombencephalon
1.4594 137 DEGLU1 Excitatory neurons, thalamus Diencephalon
2.1051 138 DEGLU2 Excitatory neurons, hypothalamus Diencephalon
0.8976 139 DEGLU3 Excitatory neurons, thalamus Diencephalon
1.4059 140 DEGLU4 Excitatory neurons, thalamus Diencephalon
0.3469 141 MEINH12 Inhibitory neurons, midbrain Mesencephalon
0.7323 143 MEINH10 Inhibitory neurons, midbrain Mesencephalon
0.725 144 MEINH9 Inhibitory neurons, midbrain Mesencephalon
0.8247 145 MEINH5 Inhibitory neurons, midbrain Mesencephalon
1.1702 146 MEINH6 Inhibitory neurons, midbrain Mesencephalon
0.7971 147 MEINH7 Inhibitory neurons, midbrain Mesencephalon
0.6728 148 MEINH4 Inhibitory neurons, midbrain Mesencephalon
1.0426 149 MEINH3 Inhibitory neurons, midbrain Mesencephalon
1.45 150 HBINH5 Inhibitory neurons, hindbrain Rhombencephalon
1.6009 151 MEINH2 Inhibitory neurons, midbrain Mesencephalon
1.7957 152 DEINH3 Inhibitory neurons, hypothalamus Diencephalon
1.441 153 TEINH1 Inhibitory neurons, pallidum Telencephalon
0.5857 154 MEINH13 Inhibitory neurons, midbrain Mesencephalon
0.6667 158 HBINH4 Inhibitory neurons, hindbrain Rhombencephalon
0.8065 159 HBINH6 Inhibitory neurons, hindbrain Rhombencephalon
1.1818 160 HBINH2 Inhibitory neurons, hindbrain Rhombencephalon
1.6364 162 HBCHO2 Cholinergic neurons, hindbrain Rhombencephalon
1.0 163 HBGLU4 Excitatory neurons, hindbrain Rhombencephalon
2.1692 164 HBGLU5 Excitatory neurons, hindbrain Rhombencephalon
1.5079 165 HBGLU6 Excitatory neurons, hindbrain Rhombencephalon
1.5455 166 HBGLU7 Excitatory neurons, hindbrain Rhombencephalon
3.5455 167 HBGLU8 Excitatory neurons, hindbrain Rhombencephalon
1.5979 168 HBGLU9 Excitatory neurons, hindbrain Rhombencephalon
1.2 169 HBINH7 Inhibitory neurons, hindbrain Rhombencephalon
0.8182 170 HBINH8 Inhibitory neurons, hindbrain Rhombencephalon
0.7778 171 SCINH1 Inhibitory neurons, spinal cord Spinal cord
2.9412 172 CBINH2 Granular layer interneurons, cerebellum Rhombencephalon
0.9405 175 CBPC Purkinje cells Rhombencephalon
0.4017 179 SEPNBL Neuroblasts, septum Telencephalon
1.3957 180 OBNBL1 Neuroblasts, olfactory Telencephalon
0.8889 181 OBNBL2 Neuroblasts, olfactory bulb Telencephalon
1.1429 182 ENT1 Nitrergic enteric neurons Neural crest
1.2523 183 ENT2 Nitrergic enteric neurons Neural crest
0.7677 184 ENT3 Nitrergic enteric neurons Neural crest
0.4402 186 ENT5 Cholinergic enteric neurons Neural crest
0.6186 187 ENT6 Cholinergic enteric neurons Neural crest
0.5806 188 ENT7 Cholinergic enteric neurons, VGLUT2 Neural crest
0.4536 189 ENT8 Cholinergic enteric neurons, VGLUT2 Neural crest
0.7811 190 ENT9 Cholinergic enteric neurons Neural crest
0.5323 192 SYNOR2 Noradrenergic neurons, sympathetic Neural crest
3.0856 193 SYNOR3 Noradrenergic neurons, sympathetic Neural crest
0.6484 194 SYNOR4 Noradrenergic erector muscle neurons Neural crest
0.6739 195 SYNOR5 Noradrenergic erector muscle neurons Neural crest
1.1067 196 SYCHO2 Cholinergic neurons, sympathetic Neural crest
0.8235 202 PSPEP2 Peptidergic (PEP1.3), DRG Neural crest
0.3696 204 PSPEP3 Peptidergic (PEP1..4), DRG Neural crest
1.5 205 PSPEP1 Peptidergicv (PEP2), DRG Neural crest
2.0 206 PSNF3 Neurofilament (NF2/3), DRG Neural crest
1.8772 207 PSNF2 Neurofilament (NF4/5), DRG Neural crest
0.4007 209 PSNP1 Non-peptidergic (TH), DRG Neural crest
0.5556 210 PSNP2 Non-peptidergic (NP1.1), DRG Neural crest
0.5444 211 PSNP3 Non-peptidergic (NP1.2), DRG Neural crest
0.6 212 PSNP4 Non-peptidergic (NP2.1), DRG Neural crest
0.5795 213 PSNP5 Non-peptidergic (NP2.2), DRG Neural crest
1.0227 214 PSNP6 Non-peptidergic (NP3), DRG Neural crest

Chga is a marker of the following clusters

Expression Index Symbol Description Region
ENT9 ENT8 ENT6 ENT5 ENT4 ENT7 ENT3 ENT2 ENT1 ENTG1 ENTG4 ENTG2 ENTG3 ENTG6 ENTG5 ENTG7 ENMFB MOL3 MOL2 MFOL1 MOL1 MFOL2 NFOL1 NFOL2 COP2 COP1 HBSER2 HBSER1 HBSER3 HBSER4 HBSER5 TEGLU15 TEGLU16 TEGLU5 TEGLU4 TEGLU22 TEGLU23 TEGLU24 TEGLU17 TEGLU18 TEGLU19 TEGLU2 TEGLU3 TEGLU14 TEGLU13 TEGLU21 TEGLU10 TEGLU11 TEGLU20 TEGLU12 TEGLU9 TEGLU8 TEGLU7 TEINH10 TEINH11 TEINH12 TEINH9 OBINH5 TEINH5 TEINH6 TEINH7 TEINH8 TEINH4 TEINH20 TEINH13 TEINH14 TEINH16 TEINH15 TEINH19 TEINH21 HYPEP7 HYPEP6 DEINH8 MBDOP1 MBDOP2 MEGLU14 MEGLU11 MEGLU10 MEGLU9 MEGLU8 MEGLU7 MEGLU6 DEGLU5 MEGLU2 MEGLU3 MEGLU1 MEGLU5 MEGLU4 DEGLU4 DEGLU3 OBNBL1 MBCHO1 HBGLU9 SCGLU1 HBGLU10 SCGLU10 HBGLU2 HBGLU3 HBNOR HBGLU1 DEGLU2 DEGLU1 MSN1 MSN2 MSN3 MSN5 MSN4 MSN6 OEC DETPH RGDG RGSZ OPC SZNBL EPMB HYPEN OBDOP2 OBINH2 OBINH3 OBINH1 OBINH4 OBNBL2 TEGLU6 TEGLU1 DGGRC2 DGGRC1 DGNBL1 DGNBL2 OBNBL3 HYPEP3 HYPEP2 HYPEP1 CBNBL2 CBGRC CR CBNBL1 SEPNBL OBNBL5 OBNBL4 DECHO2 HYPEP5 DEINH7 HYPEP4 HBGLU8 HBGLU6 HBGLU7 HBGLU5 HBGLU4 HBCHO2 HBCHO1 HBCHO3 HBADR HBCHO4 TECHO DECHO1 SCINH1 HBINH8 HBINH7 HBINH5 CBINH2 CBPC CBINH1 MEINH1 TEINH17 TEINH18 DEINH2 DEINH1 DEINH6 MEINH13 MEINH8 MEINH14 DEINH4 DEINH5 TEINH2 TEINH1 HBINH4 HBINH3 HBINH1 SCINH11 MEINH3 MEINH4 DEINH3 MEINH2 MEINH7 MEINH5 MEINH12 MEINH11 MEINH9 MEINH10 MEINH6 HBINH6 HBINH2 SCGLU8 SCGLU9 SCGLU7 SCGLU2 SCGLU3 SCGLU4 SCGLU6 SCGLU5 SCINH5 SCINH6 SCINH7 HBINH9 SCINH2 SCINH4 SCINH3 SCINH10 SCINH9 SCINH8 TEINH3 OBDOP1 HYPEP8 ABC VLMC2 VLMC1 VSMCA PER3 VECA PER2 PER1 VECV VECC MGL1 MGL2 MGL3 PVM2 PVM1 SCHW SATG2 SATG1 ACBG ACOB ACTE1 ACTE2 ACNT1 ACNT2 ACMB EPEN EPSC CHOR SYNOR3 SYNOR2 SYNOR1 SYNOR4 SYNOR5 SYCHO2 SYCHO1 PSPEP1 PSPEP3 PSPEP2 PSPEP4 PSPEP5 PSPEP6 PSPEP7 PSPEP8 PSNF2 PSNF3 PSNF1 PSNP1 PSNP3 PSNP2 PSNP5 PSNP4 PSNP6